New
approach to immunotherapy leads to complete response in
breast cancer patient unresponsive to other treatments
A novel approach to immunotherapy developed by researchers at
the National Cancer Institute (NCI) has led to the complete
regression of breast cancer in a patient who was unresponsive to
all other treatments. This patient received the treatment in a
clinical trial led by Steven A. Rosenberg, M.D., Ph.D., chief of
the Surgery Branch at NCI’s Center for Cancer Research (CCR),
and the findings were published June 4, 2018 in Nature Medicine.
NCI is part of the National Institutes of Health.
“We’ve developed a high-throughput method to identify mutations
present in a cancer that are recognized by the immune system,”
Dr. Rosenberg said. “This research is experimental right now.
But because this new approach to immunotherapy is dependent on
mutations, not on cancer type, it is in a sense a blueprint we
can use for the treatment of many types of cancer.”
The new immunotherapy approach is a modified form of adoptive
cell transfer (ACT). ACT has been effective in treating
melanoma, which has high levels of somatic, or acquired,
mutations. However, it has been less effective with some common
epithelial cancers, or cancers that start in the lining of
organs, that have lower levels of mutations, such as stomach,
esophageal, ovarian, and breast cancers.
In an ongoing phase 2 clinical trial, the investigators are
developing a form of ACT that uses tumor-infiltrating
lymphocytes (TILs) that specifically target tumor cell mutations
to see if they can shrink tumors in patients with these common
epithelial cancers. As with other forms of ACT, the selected
TILs are grown to large numbers in the laboratory and are then
infused back into the patient (who has in the meantime undergone
treatment to deplete remaining lymphocytes) to create a stronger
immune response against the tumor.
A patient with metastatic breast cancer came to the trial after
receiving multiple treatments, including several chemotherapy
and hormonal treatments, that had not stopped her cancer from
progressing. To treat her, the researchers sequenced DNA and RNA
from one of her tumors, as well as normal tissue to see which
mutations were unique to her cancer, and identified 62 different
mutations in her tumor cells.
The researchers then tested different TILs from the patient to
find those that recognized one or more of these mutated
proteins. TILs recognized four of the mutant proteins, and the
TILs then were expanded and infused back into the patient. She
was also given the checkpoint inhibitor pembrolizumab to prevent
the possible inactivation of the infused T cells by factors in
the tumor microenvironment. After the treatment, all of this
patient’s cancer disappeared and has not returned more than 22
months later.
“This is an illustrative case report that highlights, once
again, the power of immunotherapy,” said Tom Misteli, Ph.D.,
director of CCR at NCI. “If confirmed in a larger study, it
promises to further extend the reach of this T-cell therapy to a
broader spectrum of cancers.”
Investigators have seen similar results using mutation-targeted
TIL treatment for patients in the same trial with other
epithelial cancers, including liver cancer and colorectal
cancer. Dr. Rosenberg explained that results like this in
patients with solid epithelial tumors are important because ACT
has not been as successful with these kinds of cancers as with
other types that have more mutations.
He said the “big picture” here is this kind of treatment is not
cancer-type specific. “All cancers have mutations, and that’s
what we’re attacking with this immunotherapy,” he said. “It is
ironic that the very mutations that cause the cancer may prove
to be the best targets to treat the cancer.”
The research team includes Nikolaos Zacharakis, Ph.D.; Steven A.
Feldman, Ph.D.; and Stephanie L. Goff, M.D.
For more on the clinical trial, see:
https://clinicaltrials.gov/ct2/show/NCT01174121
https://www.bbc.com/news/health-44338276
Remarkable'
therapy beats terminal breast cancer
by James
Gallagher
The life of a woman with terminal breast cancer has been saved
by a pioneering new therapy, say US researchers.
It involved pumping 90 billion cancer-killing immune cells into
her body.
Judy Perkins had been given three months to live, but two years
later there is no sign of cancer in her body.
The team at the US National Cancer Institute says the therapy is
still experimental, but could transform the treatment of all
cancer.
Judy - who lives in Florida - had spreading, advanced breast
cancer that could not be treated with conventional therapy.
She had tennis ball-sized tumours in her liver and secondary
cancers throughout her body.
She told the BBC: "About a week after [the therapy] I started to
feel something, I had a tumour in my chest that I could feel
shrinking.
"It took another week or two for it to completely go away."
She remembers her first scan after the procedure when the
medical staff "were all very excited and jumping around".
It was then she was told that she was likely to be cured.
Now she's filling her life with backpacking and sea kayaking and
has just taken five weeks circumnavigating Florida.
Living
therapy
The technology is a "living drug" made from a patient's own
cells at one of the world's leading centres of cancer research.
Dr Steven Rosenberg, chief of surgery at the National Cancer
Institute, told the BBC: "We're talking about the most highly
personalised treatment imaginable."
It remains experimental and still requires considerably more
testing before it can be used more widely, but this is how it
works: it starts by getting to know the enemy.
A patient's tumour is genetically analysed to identify the rare
changes that might make the cancer visible to the immune system.
Out of the 62 genetic abnormalities in this patient, only four
were potential lines of attack.
Next researchers go hunting. A patient's immune system will
already be attacking the tumour, it's just losing the fight
between white blood cells and cancer.
The scientists screen the patient's white blood cells and
extract those capable of attacking the cancer.
These are then grown in huge quantities in the laboratory.
Around 90 billion were injected back into the 49-year-old
patient, alongside drugs to take the brakes off the immune
system.
'Paradigm
shift'
These are the results from a single patient and much larger
trials will be needed to confirm the findings.
The challenge so far in cancer immunotherapy is it tends to work
spectacularly for some patients, but the majority do not
benefit.
Dr Rosenberg added: "This is highly experimental and we're just
learning how to do this, but potentially it is applicable to any
cancer.
"At lot of works needs to be done, but the potential exists for
a paradigm shift in cancer therapy - a unique drug for every
cancer patient - it is very different to any other kind of
treatment."
The details were published in journal Nature Medicine.
Commenting on the findings, Dr Simon Vincent, director of
research at Breast Cancer Now, said the research was "world
class".
He told the BBC: "We think this is a remarkable result.
"It's the first opportunity to see this sort of immunotherapy in
the most common sort of breast cancer at the moment it has only
been tested in one patient,
"There's a huge amount of work that needs to be done, but
potentially it could open up a whole new area of therapy for a
large number of people."
https://www.nature.com/articles/s41591-018-0040-8
Nature Medicinevolume 24, pages724–730 (2018) |
Immune
recognition of somatic mutations leading to complete durable
regression in metastatic breast cancer
N.
Zacharakis, et al.
Abstract
Immunotherapy using either checkpoint blockade or the adoptive
transfer of antitumor lymphocytes has shown effectiveness in
treating cancers with high levels of somatic mutations—such as
melanoma, smoking-induced lung cancers and bladder cancer—with
little effect in other common epithelial cancers that have lower
mutation rates, such as those arising in the gastrointestinal
tract, breast and ovary1,2,3,4,5,6,7. Adoptive transfer of
autologous lymphocytes that specifically target proteins encoded
by somatically mutated genes has mediated substantial objective
clinical regressions in patients with metastatic bile duct,
colon and cervical cancers8,9,10,11. We present a patient with
chemorefractory hormone receptor (HR)-positive metastatic breast
cancer who was treated with tumor-infiltrating lymphocytes
(TILs) reactive against mutant versions of four proteins—SLC3A2,
KIAA0368, CADPS2 and CTSB. Adoptive transfer of these
mutant-protein-specific TILs in conjunction with interleukin
(IL)-2 and checkpoint blockade mediated the complete durable
regression of metastatic breast cancer, which is now ongoing for
>22 months, and it represents a new immunotherapy approach
for the treatment of these patients.
Patents
https://worldwide.espacenet.com/advancedSearch?locale=en_EP
METHODS
OF ISOLATING T CELLS AND T CELL RECEPTORS HAVING ANTIGENIC
SPECIFICITY FOR A CANCER-SPECIFIC MUTATION FROM PERIPHERAL
BLOOD
US2018148690
[ PDF ]
Disclosed are methods of isolating T cells and TCRs having
antigenic specificity for a mutated amino acid sequence encoded
by a cancer-specific mutation. Also disclosed are related
methods of preparing a population of cells, populations of
cells, TCRs, pharmaceutical compositions, and methods of
treating or preventing cancer.
BACKGROUND
OF THE INVENTION
[0003] Adoptive cell therapy (ACT) using tumor infiltrating
lymphocytes (TIL) or cells that have been genetically engineered
to express an anti-cancer antigen T cell receptor (TCR) can
produce positive clinical responses in some cancer patients.
Nevertheless, obstacles to the successful use of ACT for the
widespread treatment of cancer and other diseases remain. For
example, T cells and TCRs that specifically recognize cancer
antigens may be difficult to identify and/or isolate from a
patient. Accordingly, there is a need for improved methods of
obtaining cancer-reactive T cells and TCRs.
BRIEF
SUMMARY OF THE INVENTION
[0004] An embodiment of the invention provides a method of
isolating T cells having antigenic specificity for a mutated
amino acid sequence encoded by a cancer-specific mutation, the
method comprising obtaining a bulk population of peripheral
blood mononuclear cells (PBMCs) from a sample of peripheral
blood from a patient; selecting T cells that express programmed
cell death 1 (PD-1) from the bulk population; separating the T
cells that express PD-1 from cells that do not express PD-1 to
obtain a T cell population enriched for T cells that express
PD-1; identifying one or more genes in the nucleic acid of a
cancer cell of the patient, each gene containing a
cancer-specific mutation that encodes a mutated amino acid
sequence; inducing autologous antigen presenting cells (APCs) of
the patient to present the mutated amino acid sequence;
co-culturing T cells from the population enriched for T cells
that express PD-1 with the autologous APCs that present the
mutated amino acid sequence; and selecting the T cells that (a)
were co-cultured with the autologous APCs that present the
mutated amino acid sequence and (b) have antigenic specificity
for the mutated amino acid sequence presented in the context of
a major histocompatability complex (MHC) molecule expressed by
the patient.

METHODS
OF PRODUCING ENRICHED POPULATIONS OF TUMOR REACTIVE T CELLS
FROM PERIPHERAL BLOOD
US2018133253
[ PDF ]
Methods of obtaining a
cell population enriched for tumor-reactive T cells, the method
comprising: (a) obtaining a bulk population of peripheral blood
mononuclear cells (PBMCs) from a sample of peripheral blood; (b)
specifically selecting CD8+ T cells that also express PD-1
and/or TIM-3 from the bulk population; and (c) separating the
cells selected in (b) from unselected cells to obtain a cell
population enriched for tumor-reactive T cells are disclosed.
Related methods of administering a cell population enriched for
tumor-reactive T cells to a mammal, methods of obtaining a
pharmaceutical composition comprising a cell population enriched
for tumor-reactive T cells, and isolated or purified cell
populations are also disclosed.
VIRAL
METHODS OF T CELL THERAPY
WO2018081476
[ PDF
]
Methods of producing a
population of genetically modified cells using viral or
non-viral vectors. Disclosed are also modified viruses for
producing a population of genetically modified cells and/or for
the treatment of cancer.
TUMOR
INFILTRATING LYMPHOCYTES AND METHODS OF THERAPY
WO2018075664
[ PDF ]
Methods of producing a
population of genetically modified cells using viral or
non-viral vectors. Disclosed are also modified viruses for
producing a population of genetically modified cells and/or for
the treatment of cancer.
METHODS
OF PREPARING T CELLS OR T CELL THERAPY
WO2017070395
[ PDF
]
Provided herein are
methods for delaying or inhibiting T cell maturation or
differentiation in vitro for a T cell therapy, comprising
contacting one or more T cells from a subject in need of a T
cell therapy with an AKT inhibitor and at least one of exogenous
Interleukin-7 (IL-7) and exogenous Interleukin-15 (IL-15),
wherein the resulting T cells exhibit delayed maturation or
differentiation. In some embodiments, the method further
comprises administering the one or more T cells to a subject in
need of a T cell therapy.